Dear There,
I got an error shown below when I compiled LAMMPS with optional packages, reax, poems, and meam. I do not understand the error origin and do not know how to fix it. Any suggestion would be highly appreciated.
OS: CentOS 7
Compiler: Intel® Parallel Studio XE 2017 (cluster version)
Makefile: default file (Makefile.mpi) and optional file (Makefile.intel_cpu_mpi)
LAMMPS version: stable one released by Nov 17, 2016 and beta version released by Feb. 13, 2017
Appreciatively,
Leon
mpiicpc -g -qopenmp -xHost -O2 -fp-model fast=2 -no-prec-div -qoverride-limits -L../../lib/reax -L../../lib/meam -L../../lib/poems -L/opt/intel/compilers_and_libraries_2017.1.132/linux/mpi/intel64/lib -L/opt/intel/fce/10.0.023/lib fix_deform.o rerun.o compute.o atom.o fix_press_berendsen.o pair_reax.o minimize.o fix_reax_bonds.o min.o fix_print.o math_extra.o change_box.o angle.o pair_buck.o fix_drag.o compute_chunk_atom.o compute_rdf.o pair_dpd.o pair_lj_cut_coul_dsf.o fix_gravity.o compute_msd_chunk.o fix_shear_history.o fix_nvt_sllod.o fix_tmd.o compute_property_local.o compute_dipole_chunk.o compute_angle_local.o neigh_list.o random_mars.o fix_lineforce.o min_fire.o imbalance.o atom_vec_body.o compute_com.o pair_soft.o delete_bonds.o fix_wall.o library.o update.o pair_lj_gromacs_coul_gromacs.o image.o fix_spring_self.o fix_nve_noforce.o pair_hybrid.o dihedral.o angle_hybrid.o compute_angle.o dump_movie.o atom_vec_line.o input.o pair_lj96_cut.o atom_vec_charge.o compute_pe_atom.o pair_buck_coul_cut.o compute_reduce.o min_hftn.o compute_pair_local.o compute_temp_sphere.o pair_zero.o compute_heat_flux.o compute_temp_region.o angle_zero.o imbalance_var.o fix_ave_time.o fix_npt_sphere.o fix_spring_rg.o compute_angmom_chunk.o timer.o fix_ave_atom.o neigh_bond.o fix_wall_region.o dihedral_zero.o compute_slice.o fix_halt.o compute_temp_com.o fix_wall_lj126.o fix_move.o fix_nve_sphere.o region_cone.o neigh_respa.o compute_gyration_chunk.o compute_hexorder_atom.o pair_lj_smooth.o atom_vec_hybrid.o irregular.o compute_vcm_chunk.o memory.o fix_setforce.o atom_map.o fix_nh_sphere.o replicate.o fix_nve.o fix_recenter.o fix_wall_lj93.o compute_temp_deform.o fix_langevin.o reader.o pair_lj_cut.o fix_box_relax.o read_restart.o fix_store.o compute_group_group.o compute_msd.o pair_beck.o verlet.o fix_spring.o bond_zero.o min_quickmin.o pair_born_coul_wolf.o fix_wall_lj1043.o pair_coul_wolf.o pair_coul_dsf.o compute_reduce_region.o compute_pe.o thermo.o improper_zero.o compute_contact_atom.o comm_tiled.o fix_nh.o region_sphere.o fix_wall_harmonic.o pair.o region_intersect.o fix_restrain.o compute_omega_chunk.o output.o comm.o variable.o body.o neigh_half_bin.o pair_meam.o fix_planeforce.o fix_ave_correlate.o bond.o compute_cna_atom.o neigh_request.o domain.o fix_controller.o universe.o compute_improper.o write_dump.o pair_table.o fix_store_state.o region.o fix_enforce2d.o respa.o compute_temp_partial.o info.o dump_custom.o fix_temp_csld.o pair_lj_cut_coul_cut.o fix_poems.o neigh_half_multi.o fix_deprecated.o create_bonds.o region_union.o pair_dpd_tstat.o neighbor.o imbalance_group.o compute_erotate_sphere.o fix_vector.o dump_cfg.o molecule.o dihedral_hybrid.o fix_temp_csvr.o write_coeff.o velocity.o fix_nph.o min_cg.o procmap.o compute_cluster_atom.o pair_zbl.o neigh_half_nsq.o pair_born_coul_dsf.o imbalance_neigh.o integrate.o fix_ave_histo_weight.o pair_lj_smooth_linear.o math_special.o comm_brick.o force.o fix_balance.o finish.o read_data.o compute_dihedral_local.o fix_ave_histo.o displace_atoms.o improper.o reader_xyz.o compute_com_chunk.o neigh_shardlow.o min_linesearch.o imbalance_time.o pair_lj_cut_coul_debye.o pair_mie_cut.o imbalance_store.o atom_vec.o fix_wall_reflect.o neigh_gran.o bond_hybrid.o compute_stress_atom.o fix_respa.o modify.o dump_local.o fix_spring_chunk.o fix_viscous.o dump_image.o compute_erotate_sphere_atom.o compute_pair.o rcb.o balance.o compute_temp.o error.o compute_pressure.o set.o fix_property_atom.o delete_atoms.o fix.o neigh_stencil.o pair_lj_cubic.o compute_displace_atom.o compute_dihedral.o dump.o main.o create_box.o atom_vec_sphere.o compute_bond_local.o compute_improper_local.o fix_dt_reset.o compute_inertia_chunk.o fix_addforce.o citeme.o lammps.o random_park.o compute_vacf.o region_plane.o region_cylinder.o compute_centro_atom.o atom_vec_tri.o write_data.o pair_lj_gromacs.o compute_bond.o fix_store_force.o create_atoms.o compute_torque_chunk.o pair_coul_debye.o fix_external.o lattice.o compute_property_chunk.o compute_coord_atom.o fix_group.o fix_npt.o special.o pair_hybrid_overlay.o compute_ke_atom.o fix_read_restart.o compute_property_atom.o pair_lj_expand.o neigh_derive.o fix_minimize.o improper_hybrid.o pair_gauss.o pair_morse.o write_restart.o dump_dcd.o min_sd.o region_prism.o pair_coul_streitz.o fix_aveforce.o fix_nph_sphere.o fix_nvt_sphere.o dump_atom.o fix_temp_rescale.o kspace.o compute_temp_chunk.o atom_vec_ellipsoid.o fix_indent.o compute_ke.o pair_coul_cut.o fix_momentum.o read_dump.o run.o group.o dump_xyz.o pair_yukawa.o compute_temp_ramp.o fix_nvt.o fix_heat.o fix_adapt.o compute_gyration.o fix_nve_limit.o reader_native.o atom_vec_atomic.o fix_temp_berendsen.o compute_temp_profile.o neigh_full.o pair_born.o compute_orientorder_atom.o fix_ave_chunk.o region_block.o -lreax -lmeam -lpoems -LKLROOT/lib/intel64/ -lmkl_intel_ilp64 -lmkl_sequential -lmkl_core -lifcore -lifcore -lsvml -lompstub -limf -ltbbmalloc -o ../lmp_mpi
ld: cannot find -lompstub
make[1]: *** [../lmp_mpi] Error 1
make[1]: Leaving directory `/home/group/Downloads/lammps-17Nov16/src/Obj_mpi'
make: *** [mpi] Error 2